SMTL ID : 3oub.1

MDR769 HIV-1 protease complexed with NC/p1 hepta-peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

1 x GLN- VAL- ASN- PHE- LEU- GLY- LYS: NC/p1 substrate peptide(Non-covalent)

GLN-VAL-ASN-PHE-LEU-GLY-LYS.1: 22 residues within 4Å: Chain A: R.8, L.23, N.25, G.27, A.28, D.29, T.82, V.84 Chain B: R.8, L.23, N.25, G.27, A.28, D.29, D.30, V.32, K.45, L.46, I.47, G.48, T.82, V.84 19 PLIP interactions: 13 interactions with chain B, 6 interactions with chain A Hydrophobic interactions: B:A.28, B:D.30, B:V.32, B:I.47, A:L.23, A:T.82, A:V.84 Hydrogen bonds: B:N.25, B:G.27, B:D.29, B:D.30, B:L.46, B:G.48, B:G.48, B:G.48, A:N.25, A:G.27, A:D.29 Water bridges: B:L.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Z. et al., Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease. Protein J. (2011)

Release Date

2011-03-30

Peptides

MDR HIV-1 protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MDR HIV-1 protease

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