SMTL ID : 3ouc.1

MDR769 HIV-1 protease complexed with p2/NC hepta-peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

1 x THR- ILE- MET- MET- GLN- ARG- GLY: p2/NC substrate peptide(Non-covalent)

THR-ILE-MET-MET-GLN-ARG-GLY.1: 21 residues within 4Å: Chain A: R.8, N.25, G.27, A.28, D.29, D.30, G.48, P.81, T.82, V.84 Chain B: R.8, N.25, G.27, A.28, D.29, D.30, K.45, I.47, I.50, T.82, V.84 20 PLIP interactions: 13 interactions with chain B, 7 interactions with chain A Hydrophobic interactions: B:A.28, A:A.28, A:D.29 Hydrogen bonds: B:N.25, B:G.27, B:D.29, B:D.29, B:D.29, B:D.30, B:D.30, B:D.30, B:I.50, A:R.8, A:N.25, A:D.29 Water bridges: B:R.8, B:R.8, A:G.48, A:G.48 Salt bridges: B:K.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Z. et al., Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease. Protein J. (2011)

Release Date

2011-03-30

Peptides

MDR HIV-1 protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MDR HIV-1 protease

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