SMTL ID : 3oud.1

MDR769 HIV-1 protease complexed with CA/p2 hepta-peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ARG- VAL- LEU- PHE- GLU- ALA- MET: CA/p2 substrate peptide(Non-covalent)

ARG-VAL-LEU-PHE-GLU-ALA-MET.1: 22 residues within 4Å: Chain A: L.23, N.25, G.27, A.28, D.29, T.82, V.84 Chain B: R.8, L.23, N.25, G.27, A.28, D.29, D.30, K.45, L.46, I.47, G.48, F.53, P.81, T.82, V.84 22 PLIP interactions: 14 interactions with chain B, 8 interactions with chain A Hydrophobic interactions: B:L.23, B:D.29, B:V.84, A:L.23, A:A.28, A:T.82, A:V.84 Hydrogen bonds: B:R.8, B:N.25, B:D.29, B:D.30, B:L.46, B:G.48, B:T.82, A:N.25, A:G.27, A:D.29 Water bridges: B:R.8, B:R.8, B:G.27, B:T.82, A:R.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Z. et al., Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease. Protein J. (2011)

Release Date

2011-03-30

Peptides

MDR HIV-1 protease: A
MDR HIV-1 protease: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MDR HIV-1 protease

MDR HIV-1 protease

Related Entries With Identical Sequence