SMTL ID : 3oyp.2 (1 other biounit)

HCV NS3/4A in complex with ligand 3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.76 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PPI- DAL- 0Y8- 0Y9- 0YA: Peptidomimetic inhibitor(Non-covalent)

PPI-DAL-0Y8-0Y9-0YA.1: 18 residues within 4Å: Chain A: Q.41, S.42, F.43, H.57, G.58, D.81, V.132, L.135, K.136, G.137, S.138, S.139, F.154, R.155, A.156, A.157, V.158, C.159 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:Q.41, A:F.43, A:D.81, A:L.135, A:K.136, A:F.154, A:A.157 Hydrogen bonds: A:H.57, A:K.136, A:G.137, A:S.138, A:S.139, A:S.139, A:R.155, A:A.157, A:A.157 pi-Stacking: A:H.57

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: C.97, T.98, C.99, C.145, H.149 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.97, A:C.99, A:C.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hagel, M. et al., Selective irreversible inhibition of a protease by targeting a noncatalytic cysteine. Nat.Chem.Biol. (2011)

Release Date

2010-12-01

Peptides

Serine protease NS3: A
Non-structural protein 4A: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Serine protease NS3

Non-structural protein 4A

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