SMTL ID : 3p2k.4 (3 other biounits)

Structure of an antibiotic related Methyltransferase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 19 residues within 4Å: Chain A: G.32, T.33, G.34, N.38, D.55, P.56, V.57, A.86, A.87, E.88, L.104, F.105, P.106, W.107, T.109, L.110, Y.113, S.195, W.197 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:G.32, A:N.38, A:A.87, A:T.109, A:T.109, A:L.110, A:S.195 Water bridges: A:T.109 pi-Cation interactions: A:W.107, A:W.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Husain, N. et al., Structural basis for the methylation of A1408 in 16S rRNA by a panaminoglycoside resistance methyltransferase NpmA from a clinical isolate and analysis of the NpmA interactions with the 30S ribosomal subunit. Nucleic Acids Res. (2011)

Release Date

2010-11-17

Peptides

16S rRNA methylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

16S rRNA methylase

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