- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.96 Å
- Oligo State
- homo-tetramer
- Ligands
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 15 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
PG4.2: 7 residues within 4Å:- Chain A: I.20, D.24, F.25
- Chain B: G.60, D.63, Q.64, R.67
3 PLIP interactions:1 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:Q.64
- Water bridges: A:F.25, A:F.25
PG4.3: 3 residues within 4Å:- Chain A: T.7, G.10, E.149
No protein-ligand interaction detected (PLIP)PG4.4: 9 residues within 4Å:- Chain A: A.45, G.46, K.47, K.75, E.76, E.77, G.78, I.79
- Chain B: D.101
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:A.45, A:K.47
PG4.5: 4 residues within 4Å:- Chain A: N.37, V.39, D.43, Y.44
No protein-ligand interaction detected (PLIP)PG4.7: 6 residues within 4Å:- Chain B: F.8, K.9, I.13
- Chain D: L.36, F.89
- Ligands: PG4.9
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:K.9
PG4.8: 3 residues within 4Å:- Chain B: K.9, G.10, T.151
No protein-ligand interaction detected (PLIP)PG4.9: 7 residues within 4Å:- Chain B: T.59, G.60, V.61, C.62, R.130
- Chain D: R.93
- Ligands: PG4.7
5 PLIP interactions:4 interactions with chain B, 1 interactions with chain D- Hydrogen bonds: B:T.59, B:G.60, B:V.61, B:R.130, D:R.93
PG4.11: 8 residues within 4Å:- Chain C: A.45, G.46, K.47, K.75, E.76, E.77, G.78, I.79
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:K.47
- Water bridges: C:K.47
PG4.12: 5 residues within 4Å:- Chain C: D.33, N.37, V.39, D.43, Y.44
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:D.33
- Water bridges: C:Y.44
PG4.13: 7 residues within 4Å:- Chain C: D.33, N.34, D.35, I.79, D.101, V.103, I.104
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:D.33
- Water bridges: C:D.33, C:N.34, C:T.105
PG4.14: 5 residues within 4Å:- Chain C: S.71, D.72, S.74, K.164
- Ligands: SO4.10
3 PLIP interactions:3 interactions with chain C- Water bridges: C:D.72, C:S.74, C:K.164
PG4.15: 3 residues within 4Å:- Chain C: Q.64, K.68, F.153
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:Q.64
PG4.16: 6 residues within 4Å:- Chain C: D.58, T.59, G.60, V.61, D.63, Q.64
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:G.60, C:V.61
PG4.17: 5 residues within 4Å:- Chain C: E.22, Y.143, K.144, E.145, I.146
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:K.144, C:K.144, C:I.146
PG4.18: 5 residues within 4Å:- Chain B: K.92
- Chain D: D.58, T.59, G.60, Q.64
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:G.60, D:Q.64
- 1 x DTV: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL(Non-covalent)
- 1 x DTU: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bhattacharyya, S. et al., Crystal structure of an atypical two-cysteine peroxiredoxin (SAOUHSC_01822) from Staphylococcus aureus NCTC8325. To be Published
- Release Date
- 2011-10-19
- Peptides
- Probable thiol peroxidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.96 Å
- Oligo State
- homo-tetramer
- Ligands
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 15 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- 1 x DTV: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL(Non-covalent)
- 1 x DTU: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bhattacharyya, S. et al., Crystal structure of an atypical two-cysteine peroxiredoxin (SAOUHSC_01822) from Staphylococcus aureus NCTC8325. To be Published
- Release Date
- 2011-10-19
- Peptides
- Probable thiol peroxidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D