SMTL ID : 3p8z.1 (1 other biounit)

Dengue Methyltransferase bound to a SAM-based inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x 36A: (S)-2-amino-4-(((2S,3S,4R,5R)-5-(6-(3-chlorobenzylamino)-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methylthio)butanoic acid(Non-covalent)

36A.1: 21 residues within 4Å: Chain A: S.61, G.63, G.86, C.87, G.88, G.90, G.91, W.92, T.109, K.110, H.115, K.135, D.136, V.137, F.138, D.151, I.152, R.165, R.168, V.169, M.172 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:I.152, A:R.168, A:V.169 Hydrogen bonds: A:S.61, A:G.90, A:G.91, A:W.92, A:W.92, A:T.109, A:K.110, A:H.115, A:E.116, A:D.136, A:V.137, A:D.151 Water bridges: A:D.84, A:G.86, A:R.89, A:S.93, A:G.153 pi-Cation interactions: A:R.168

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lim, S.P. et al., Small molecule inhibitors that selectively block dengue virus methyltransferase. J.Biol.Chem. (2011)

Release Date

2010-12-08

Peptides

Non-structural protein 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Non-structural protein 5

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