SMTL ID : 3pl6.1

Structure of Autoimmune TCR Hy.1B11 in complex with HLA-DQ1 and MBP 85-99

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: N.121, E.169, H.170 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.121 NAG.2: 3 residues within 4Å: Chain B: N.21, E.24, R.25 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.21

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sethi, D.K. et al., A highly tilted binding mode by a self-reactive T cell receptor results in altered engagement of peptide and MHC. J.Exp.Med. (2011)

Release Date

2010-12-22

Peptides

MHC class II HLA-DQ-alpha chain: A
MHC class II HLA-DQ-beta chain: B
T-cell receptor alpha chain: C
MBP peptide / T-cell receptor beta chain chimera: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

MHC class II HLA-DQ-alpha chain

MHC class II HLA-DQ-beta chain

T-cell receptor alpha chain

MBP peptide / T-cell receptor beta chain chimera