SMTL ID : 3ptq.2 (1 other biounit)

The crystal structure of rice (Oryza sativa L.) Os4BGlu12 with dinitrophenyl 2-deoxy-2-fluoro-beta-D-glucopyranoside

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: S.44, Y.49, E.50, S.86, D.93, Y.105, Y.131, L.135 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:S.44, A:E.50, A:E.50, A:S.86, A:D.93, A:D.93, A:Y.105, A:Y.105

1 x NFG: 2,4-dinitrophenyl 2-deoxy-2-fluoro-beta-D-glucopyranoside(Non-covalent)

NFG.2: 17 residues within 4Å: Chain A: Q.48, H.152, W.153, N.197, E.198, W.200, T.201, F.212, H.271, N.339, Y.341, W.384, E.412, W.461, E.468, W.469, F.477 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.48, A:H.152, A:W.469 Water bridges: A:N.466 pi-Stacking: A:W.384 Halogen bonds: A:N.339, A:E.412

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sansenya, S. et al., The crystal structure of rice (Oryza sativa L.) Os4BGlu12, an oligosaccharide and tuberonic acid glucoside-hydrolyzing beta-glucosidase with significant thioglucohydrolase activity. Arch.Biochem.Biophys. (2011)

Release Date

2011-05-18

Peptides

Beta-glucosidase Os4BGlu12: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-glucosidase Os4BGlu12

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