SMTL ID : 3pyb.1 (2 other biounits)

Crystal structure of ent-copalyl diphosphate synthase from Arabidopsis thaliana in complex with 13-aza-13,14-dihydrocopalyl diphosphate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.76 Å

Oligo State

monomer

Ligands

1 x A3C: 2-(methyl{2-[(1S,4aS,8aS)-5,5,8a-trimethyl-2-methylidenedecahydronaphthalen-1-yl]ethyl}amino)ethyl trihydrogen diphosphate(Non-covalent)

A3C.1: 3 residues within 4Å: Chain A: Q.708, S.712, F.716 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Q.708

4 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.2: 8 residues within 4Å: Chain A: Y.344, K.358, K.361, E.362, Y.365, Y.400, E.666, Y.698 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.361 1PE.3: 6 residues within 4Å: Chain A: N.571, S.574, F.575, F.578, D.584, N.586 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.584 1PE.4: 6 residues within 4Å: Chain A: F.246, W.286, D.294, D.297, I.423, Y.428 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.428, A:Y.428 1PE.5: 2 residues within 4Å: Chain A: S.54, K.57 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Koksal, M. et al., Structure of ent-Copalyl Diphosphate Synthase from Arabidopsis thaliana, a Protonation-Dependent Diterpene Cyclase. To be Published

Release Date

2011-05-25

Peptides

Ent-copalyl diphosphate synthase, chloroplastic: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ent-copalyl diphosphate synthase, chloroplastic

Related Entries With Identical Sequence