SMTL ID : 3q10.2 (1 other biounit)

Pantoate-beta-alanine ligase from Yersinia pestis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

homo-dimer

Ligands

2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.1: 17 residues within 4Å: Chain A: P.31, T.32, M.33, H.37, G.39, H.40, L.43, F.151, G.152, K.154, D.155, Q.158, P.179, T.180, V.181, L.189 Ligands: GOL.2 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:M.33, A:Y.74, A:Y.74, A:G.152, A:D.155, A:D.155, A:D.155, A:Q.158, A:V.181, A:V.181, A:L.189 Water bridges: A:P.31, A:M.33, A:Q.64, A:Y.74 Salt bridges: A:H.40 AMP.4: 13 residues within 4Å: Chain B: P.31, T.32, M.33, H.37, H.40, L.43, F.151, G.152, K.154, D.155, Q.158, T.180 Ligands: GOL.5 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:M.33, B:Y.74, B:Y.74, B:G.152, B:D.155, B:D.155, B:D.155, B:Q.158, B:T.180 Salt bridges: B:H.40

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: P.31, M.33, Q.64, V.133, I.136, Q.158 Ligands: AMP.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.64, A:Q.158, A:Q.158 GOL.3: 3 residues within 4Å: Chain A: Y.156, R.163, Q.263 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.156, A:Q.263 Water bridges: A:R.163, A:R.163 GOL.5: 8 residues within 4Å: Chain B: P.31, T.32, M.33, Q.64, V.133, I.136, Q.158 Ligands: AMP.4 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:P.31, B:Q.64, B:Q.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Osipiuk, J. et al., Pantoate-beta-alanine ligase from Yersinia pestis. To be Published

Release Date

2011-02-02

Peptides

Pantoate--beta-alanine ligase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Pantoate--beta-alanine ligase

Related Entries With Identical Sequence