SMTL ID : 3q34.1 (1 other biounit)

The crystal structure of YceI-like family protein from Pseudomonas syringae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x UQ8: Ubiquinone-8(Non-covalent)

UQ8.1: 29 residues within 4Å: Chain A: L.15, F.17, S.19, K.21, E.27, V.38, I.57, L.59, R.60, R.63, L.64, F.69, I.79, L.83, L.101, L.103, A.116, L.118, F.128, V.130, I.138, F.149, L.152, A.156, L.158, V.165, V.167, L.171, F.173 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:L.15, A:F.17, A:K.21, A:V.38, A:R.60, A:F.69, A:I.79, A:L.83, A:L.101, A:L.103, A:A.116, A:L.118, A:F.128, A:V.130, A:V.130, A:F.149, A:L.152, A:L.152, A:A.156, A:L.158, A:V.165, A:V.165, A:V.167, A:V.167, A:L.171, A:F.173 Hydrogen bonds: A:R.60, A:R.63, A:R.63 UQ8.3: 32 residues within 4Å: Chain B: L.15, F.17, S.19, K.21, F.31, V.38, A.44, I.57, L.59, R.60, R.63, L.64, F.69, I.79, L.83, L.99, L.103, V.105, L.107, V.130, T.132, L.136, I.138, M.145, F.149, L.152, A.156, L.158, V.165, V.167, A.169, L.171 34 PLIP interactions: 34 interactions with chain B Hydrophobic interactions: B:L.15, B:F.17, B:K.21, B:F.31, B:V.38, B:A.44, B:R.60, B:L.64, B:F.69, B:F.69, B:I.79, B:I.79, B:L.83, B:L.83, B:L.99, B:L.103, B:V.105, B:L.107, B:L.107, B:V.130, B:T.132, B:I.138, B:I.138, B:F.149, B:F.149, B:L.152, B:A.156, B:L.158, B:V.165, B:V.165, B:V.167, B:A.169, B:L.171 Hydrogen bonds: B:R.60

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: N.10, E.11, S.13, R.14, F.31, L.32 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.11, A:F.31 Water bridges: A:R.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z. et al., The crystal structure of YceI-like family protein from Pseudomonas syringae. TO BE PUBLISHED

Release Date

2011-02-23

Peptides

YceI-like family protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

YceI-like family protein

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