SMTL ID : 3q4q.1

Crystal Structure of a deletion mutant(11-185) of hypothetical protein MJ0754 with Mn2+

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

4 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 5 residues within 4Å: Chain A: E.65, E.124, S.154, H.157 Ligands: MN.2 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.65, A:E.124, A:H.157, H2O.3, H2O.3 MN.2: 5 residues within 4Å: Chain A: E.39, E.65, H.68, D.127 Ligands: MN.1 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.39, A:E.65, A:H.68, H2O.3, H2O.3, H2O.3 MN.4: 5 residues within 4Å: Chain B: E.65, E.124, S.154, H.157 Ligands: MN.5 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.65, B:E.124, B:H.157, H2O.5, H2O.5 MN.5: 5 residues within 4Å: Chain B: E.39, E.65, H.68, D.127 Ligands: MN.4 6 PLIP interactions: 3 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:E.39, B:E.65, B:H.68, H2O.5, H2O.5, H2O.5

2 x B3P: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

B3P.3: 5 residues within 4Å: Chain A: Q.66, D.70, K.73, Y.74, E.77 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.70, A:D.70, A:Y.74, A:E.77 B3P.6: 5 residues within 4Å: Chain B: Q.66, D.70, K.73, Y.74, E.77 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:D.70, B:D.70, B:Y.74, B:E.77 Water bridges: B:D.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, E.H. et al., Structural insights into the metal binding properties of hypothetical protein MJ0754 from Methanococcus jannaschii. Proteins (2011)

Release Date

2011-05-18

Peptides

Uncharacterized protein MJ0754: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Uncharacterized protein MJ0754

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