- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x RET: RETINAL(Covalent)
- 6 x NO3: NITRATE ION(Non-functional Binders)
NO3.2: 8 residues within 4Å:- Chain A: V.74, V.77, S.78, S.81, T.126, W.127, S.130, K.256
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:S.81, A:S.81, A:T.126, A:S.130, A:S.130
- Water bridges: A:K.256
NO3.3: 6 residues within 4Å:- Chain A: N.145, T.147, K.148
- Chain B: P.62, K.65
- Ligands: 22B.6
4 PLIP interactions:1 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:K.65, A:N.145, A:T.147
- Water bridges: A:K.148
NO3.4: 6 residues within 4Å:- Chain A: P.62, K.65
- Chain C: N.145, T.147, K.148
- Ligands: 22B.9
2 PLIP interactions:1 interactions with chain C, 1 interactions with chain A- Hydrogen bonds: C:K.148, A:K.65
NO3.7: 8 residues within 4Å:- Chain B: V.74, V.77, S.78, S.81, T.126, W.127, S.130, K.256
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:S.81, B:T.126, B:S.130, B:S.130
- Water bridges: B:S.78, B:K.256
NO3.10: 5 residues within 4Å:- Chain B: N.145, T.147, K.148
- Chain C: P.62, K.65
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain C- Hydrogen bonds: B:N.145, B:T.147, C:P.62
NO3.11: 7 residues within 4Å:- Chain C: V.77, S.78, S.81, T.126, W.127, S.130, K.256
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:S.81, C:T.126, C:W.127, C:S.130, C:S.130
- 2 x 22B: BACTERIORUBERIN(Non-covalent)
22B.6: 12 residues within 4Å:- Chain A: T.147, T.151, F.155, V.189, I.193, E.197
- Chain B: I.49, V.53, T.56, V.69, I.72
- Ligands: NO3.3
12 PLIP interactions:6 interactions with chain A, 6 interactions with chain B- Hydrophobic interactions: A:T.147, A:T.151, A:F.155, A:F.155, A:V.189, A:I.193, B:I.49, B:V.53, B:V.69, B:I.72
- Hydrogen bonds: B:K.65, B:K.65
22B.9: 13 residues within 4Å:- Chain A: I.49, V.53, T.56, V.69, I.72
- Chain C: T.151, F.155, A.185, V.189, Y.192, I.193, E.197
- Ligands: NO3.4
9 PLIP interactions:6 interactions with chain C, 3 interactions with chain A- Hydrophobic interactions: C:T.151, C:F.155, C:F.155, C:A.185, C:Y.192, C:I.193, A:I.49, A:V.69, A:I.72
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kanada, S. et al., Crystal structures of anion-free blue and yellow forms of pharaonis halorhodopsin. To be Published
- Release Date
- 2011-08-31
- Peptides
- Halorhodopsin: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
D - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x RET: RETINAL(Covalent)
- 6 x NO3: NITRATE ION(Non-functional Binders)
- 2 x 22B: BACTERIORUBERIN(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kanada, S. et al., Crystal structures of anion-free blue and yellow forms of pharaonis halorhodopsin. To be Published
- Release Date
- 2011-08-31
- Peptides
- Halorhodopsin: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
D - Membrane
-
We predict this structure to be a membrane protein.