SMTL ID : 3qbu.1

Crystal structure of putative peptidoglycan deactelyase (HP0310) from Helicobacter pylori

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.57 Å

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: D.45, D.47, H.119, H.123 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.47, A:D.47, A:H.119, A:H.123, H2O.1 ZN.2: 4 residues within 4Å: Chain B: D.45, D.47, H.119, H.123 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.47, B:D.47, B:H.119, B:H.123, H2O.16 ZN.3: 4 residues within 4Å: Chain C: D.45, D.47, H.119, H.123 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:D.47, C:D.47, C:H.119, C:H.123, H2O.24 ZN.4: 5 residues within 4Å: Chain D: D.45, D.47, H.119, H.123, H.280 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:D.47, D:D.47, D:H.119, D:H.123, H2O.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shaik, M.M. et al., The Structure of Helicobacter pylori HP0310 Reveals an Atypical Peptidoglycan Deacetylase. Plos One (2011)

Release Date

2011-05-25

Peptides

Putative uncharacterized protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Putative uncharacterized protein

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