SMTL ID : 3qdz.1 (1 other biounit)

Crystal structure of the human thrombin mutant D102N in complex with the extracellular fragment of human PAR4.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x THR- PRO- SER- ILE- LEU- PRO- ALA- PRO- ARG: Proteinase-activated receptor 4(Non-covalent)

THR-PRO-SER-ILE-LEU-PRO-ALA-PRO-ARG.1: 21 residues within 4Å: Chain B: H.43, Y.47, W.50, L.96, I.179, D.199, A.200, C.201, E.202, G.203, D.204, S.205, V.225, S.226, W.227, G.228, E.229, G.230, R.233, K.236, G.238 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:Y.47, B:W.50, B:L.96, B:I.179, B:E.229, B:E.229 Hydrogen bonds: B:G.203, B:D.204, B:S.205, B:S.205, B:S.226, B:G.228, B:G.228, B:G.230, B:R.233 Salt bridges: B:H.43, B:D.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gandhi, P.S. et al., Structural basis of thrombin-protease-receptor interactions. IUBMB LIFE (2011)

Release Date

2011-06-29

Peptides

Thrombin light chain: A
Thrombin heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Thrombin light chain

Thrombin heavy chain

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