SMTL ID : 3qg1.1

Crystal structure of P-loop G239A mutant of subunit A of the A1AO ATP synthase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.95 Å

Oligo State

monomer

Ligands

6 x ACY: ACETIC ACID(Non-functional Binders)

ACY.1: 1 residues within 4Å: Chain A: G.182 No protein-ligand interaction detected (PLIP) ACY.3: 2 residues within 4Å: Chain A: K.533, E.536 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.536 Salt bridges: A:K.533 ACY.6: 1 residues within 4Å: Chain A: D.252 No protein-ligand interaction detected (PLIP) ACY.7: 3 residues within 4Å: Chain A: A.464, K.468, Y.531 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:A.464 Hydrogen bonds: A:Y.531 ACY.8: 1 residues within 4Å: Chain A: E.580 No protein-ligand interaction detected (PLIP) ACY.9: 1 residues within 4Å: Chain A: R.335 No protein-ligand interaction detected (PLIP)

3 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 5 residues within 4Å: Chain A: D.420, L.421, N.431, W.432, L.433 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:D.420, A:L.433 MPD.4: 4 residues within 4Å: Chain A: K.198, P.200, Y.201, K.202 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:P.200, A:Y.201, A:Y.201 Hydrogen bonds: A:K.198 MPD.5: 3 residues within 4Å: Chain A: Q.246, K.249, A.507 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Priya, R. et al., Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance. J.Mol.Biol. (2011)

Release Date

2011-10-05

Peptides

V-type ATP synthase alpha chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

V-type ATP synthase alpha chain