SMTL ID : 3qg9.1

crystal structure of FBF-2/gld-1 FBEa A7U mutant complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x U- G- U- G- C- C- U- U- A: 5'-R(*UP*GP*UP*GP*CP*CP*UP*UP*A)-3'(Non-covalent)

U-G-U-G-C-C-U-U-A.1: 36 residues within 4Å: Chain A: K.39, E.46, I.79, F.80, N.82, Y.83, Q.86, F.123, R.126, Q.129, Q.160, N.161, H.164, K.198, Y.199, C.201, R.202, E.250, Y.251, N.253, Y.254, Q.257, K.288, F.289, S.291, H.292, E.295, Q.335, F.336, N.338, Y.339, Q.342, S.391, S.392, K.395 Ligands: EDO.2 Protein-ligand interaction information (PLIP) not available

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: F.333, Q.335, N.338, S.392 Ligands: U-G-U-G-C-C-U-U-A.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.392, A:S.392 Water bridges: A:S.392

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Koh, Y.Y. et al., Stacking interactions in PUF-RNA complexes. Rna (2011)

Release Date

2011-03-23

Peptides

Fem-3 mRNA-binding factor 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fem-3 mRNA-binding factor 2

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