SMTL ID : 3qm3.2 (3 other biounits)

1.85 Angstrom Resolution Crystal Structure of Fructose-bisphosphate Aldolase (Fba) from Campylobacter jejuni

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.108, E.172, H.224, H.263 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.108, A:E.172, A:H.224, A:H.263, H2O.1 ZN.6: 4 residues within 4Å: Chain B: H.108, E.172, H.224, H.263 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.108, B:E.172, B:H.224, B:H.263, H2O.21

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: G.13, V.14, H.92, K.96, Y.127 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.14, A:H.92, A:Y.127

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain A: R.330 Chain B: S.64, G.67 9 PLIP interactions: 7 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:S.64, B:G.67 Water bridges: B:N.38, B:N.38, B:N.65, B:G.66, B:D.287, A:R.330 Salt bridges: A:R.330 SO4.4: 4 residues within 4Å: Chain A: S.64, G.66, G.67 Chain B: R.330 8 PLIP interactions: 5 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:S.64, A:S.64, A:G.66, A:G.67 Water bridges: A:N.65, B:R.330, B:R.330 Salt bridges: B:R.330 SO4.5: 7 residues within 4Å: Chain A: G.264, G.265, S.266, N.285, I.286, D.287, T.288 12 PLIP interactions: 10 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:G.264, A:S.266, A:S.266, A:N.285, A:D.287, A:T.288, A:T.288 Water bridges: A:N.285, A:T.288, A:T.288, B:K.324, B:K.324 SO4.10: 4 residues within 4Å: Chain A: R.334, E.338 Chain B: K.74, N.75 7 PLIP interactions: 3 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:E.338, B:N.75, B:N.75 Water bridges: A:R.334, B:K.74 Salt bridges: A:R.334, B:K.74 SO4.11: 7 residues within 4Å: Chain B: S.266, N.285, I.286, D.287, T.288 Ligands: CL.7, FMT.9 8 PLIP interactions: 7 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:S.266, B:D.287, B:T.288, B:T.288 Water bridges: B:G.264, B:N.285, B:N.285, A:K.324

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.7: 6 residues within 4Å: Chain B: S.266, I.286, D.287, T.288, D.289 Ligands: SO4.11 Ligand excluded by PLIP

2 x FMT: FORMIC ACID(Non-functional Binders)

FMT.8: 4 residues within 4Å: Chain B: G.13, V.14, H.92, Q.133 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:V.14, B:H.92, B:Q.133 FMT.9: 2 residues within 4Å: Chain B: T.288 Ligands: SO4.11 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:T.288, B:T.288 Water bridges: B:G.225, B:S.266, A:K.324

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Minasov, G. et al., 1.85 Angstrom Resolution Crystal Structure of Fructose-bisphosphate Aldolase (Fba) from Campylobacter jejuni. TO BE PUBLISHED

Release Date

2011-02-23

Peptides

Fructose-bisphosphate aldolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Fructose-bisphosphate aldolase

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