SMTL ID : 3qml.2 (1 other biounit)

The structural analysis of Sil1-Bip complex reveals the mechanism for Sil1 to function as a novel nucleotide exchange factor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.31 Å

Oligo State

hetero-1-1-mer

Ligands

4 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 8 residues within 4Å: Chain A: G.22, T.23, T.24, Y.25, G.210, G.211, G.212, T.213 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.23, A:T.23, A:T.24, A:Y.25, A:G.211, A:G.212 PO4.2: 4 residues within 4Å: Chain A: E.240, D.243, E.277, K.280 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.280 PO4.3: 5 residues within 4Å: Chain B: F.112, P.113, N.114, F.115, K.118 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.114, B:N.114, B:F.115 Salt bridges: B:K.118 PO4.4: 4 residues within 4Å: Chain B: Y.167, E.168, N.171, E.220 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.171, B:E.220, B:E.220

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yan, M. et al., Structural analysis of the Sil1-Bip complex reveals the mechanism for Sil1 to function as a nucleotide-exchange factor. Biochem.J. (2011)

Release Date

2011-06-29

Peptides

78 kDa glucose-regulated protein homolog: A
Nucleotide exchange factor SIL1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

78 kDa glucose-regulated protein homolog

Nucleotide exchange factor SIL1

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