SMTL ID : 3qoy.1

Crystal structure of ribosomal protein L1 from Aquifex aeolicus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.56, K.171 Ligands: ACY.4 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.171 SO4.2: 2 residues within 4Å: Chain A: D.170, K.171 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.171 Salt bridges: A:K.171

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.3: 4 residues within 4Å: Chain A: P.69, H.70, G.71, K.188 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:P.69, A:H.70, A:G.71, A:K.188 Water bridges: A:G.71, A:K.188

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.4: 3 residues within 4Å: Chain A: D.54, R.56 Ligands: SO4.1 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:R.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nikonova, E.Yu. et al., Crystal Structure of Ribosomal Protein L1 from the Bacterium Aquifex Aeolicus. Crystallography Reports (2011)

Release Date

2011-12-28

Peptides

50S ribosomal protein L1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

50S ribosomal protein L1