- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.82 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x R1P: 1-O-phosphono-alpha-D-ribofuranose(Non-covalent)
- 6 x URA: URACIL(Non-covalent)
URA.2: 12 residues within 4Å:- Chain A: T.120, C.121, G.122, K.185, F.188, Q.191, H.192, S.218, E.219, M.220, V.243
- Ligands: R1P.1
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:V.243
- Hydrogen bonds: A:T.120, A:G.122, A:K.185, A:Q.191, A:Q.191
- Water bridges: A:T.120
URA.4: 11 residues within 4Å:- Chain B: T.120, C.121, G.122, K.185, F.188, Q.191, H.192, S.218, E.219, M.220
- Ligands: R1P.3
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:T.120, B:G.122, B:K.185, B:Q.191, B:Q.191
- Water bridges: B:T.120
URA.6: 12 residues within 4Å:- Chain C: T.120, C.121, G.122, K.185, F.188, Q.191, H.192, S.218, E.219, M.220, V.243
- Ligands: R1P.5
7 PLIP interactions:7 interactions with chain C- Hydrophobic interactions: C:V.243
- Hydrogen bonds: C:T.120, C:T.120, C:G.122, C:K.185, C:Q.191, C:Q.191
URA.8: 12 residues within 4Å:- Chain D: T.120, C.121, G.122, K.185, F.188, Q.191, H.192, S.218, E.219, M.220, V.243
- Ligands: R1P.7
7 PLIP interactions:7 interactions with chain D- Hydrophobic interactions: D:V.243
- Hydrogen bonds: D:T.120, D:G.122, D:K.185, D:Q.191, D:Q.191
- Water bridges: D:T.120
URA.10: 12 residues within 4Å:- Chain E: T.120, C.121, G.122, K.185, F.188, Q.191, H.192, S.218, E.219, M.220, V.243
- Ligands: R1P.9
6 PLIP interactions:6 interactions with chain E- Hydrophobic interactions: E:V.243
- Hydrogen bonds: E:T.120, E:G.122, E:K.185, E:Q.191, E:Q.191
URA.12: 12 residues within 4Å:- Chain F: T.120, C.121, G.122, K.185, F.188, Q.191, H.192, S.218, E.219, M.220, V.243
- Ligands: R1P.11
5 PLIP interactions:5 interactions with chain F- Hydrophobic interactions: F:V.243
- Hydrogen bonds: F:T.120, F:K.185, F:Q.191, F:Q.191
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tran, T.H. et al., The Crystal Structure of Streptococcus pyogenes Uridine Phosphorylase Reveals a Distinct Subfamily of Nucleoside Phosphorylases. Biochemistry (2011)
- Release Date
- 2011-08-24
- Peptides
- Uridine phosphorylase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
MB
NC
OD
PE
QF
R
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.82 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x R1P: 1-O-phosphono-alpha-D-ribofuranose(Non-covalent)
- 6 x URA: URACIL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tran, T.H. et al., The Crystal Structure of Streptococcus pyogenes Uridine Phosphorylase Reveals a Distinct Subfamily of Nucleoside Phosphorylases. Biochemistry (2011)
- Release Date
- 2011-08-24
- Peptides
- Uridine phosphorylase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
MB
NC
OD
PE
QF
R