SMTL ID : 3qtb.1

Structure of the universal stress protein from Archaeoglobus fulgidus in complex with dAMP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

1 x D5M: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE(Non-covalent)

D5M.1: 15 residues within 4Å: Chain A: A.30, V.31, D.32, R.37, V.59, H.60, S.61, P.105, I.109, I.123, G.124, G.137, S.138, V.139, A.140 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:D.32 Hydrogen bonds: A:S.61, A:S.61, A:G.124, A:G.124, A:V.139, A:A.140 Water bridges: A:R.37

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 1 residues within 4Å: Chain B: R.101 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.101 ACT.3: 5 residues within 4Å: Chain B: D.32, K.33, R.37, K.127, R.128 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:K.33, B:K.127, B:R.128 Hydrogen bonds: B:D.32, B:R.128 Salt bridges: B:K.33, B:R.37 ACT.4: 1 residues within 4Å: Chain B: G.65 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.65

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tkaczuk, K.L. et al., Structural and functional insight into the universal stress protein family. Evol Appl (2013)

Release Date

2011-03-30

Peptides

Uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uncharacterized protein

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