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SMTL ID : 3qun.1
Crystal structure of fosfomycin resistance kinase FomA from Streptomyces wedmorensis complexed with MgATP
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.87 Å
Oligo State
homo-dimer
Ligands
2 x
ATP
:
ADENOSINE-5'-TRIPHOSPHATE
(Non-covalent)
ATP.1:
20 residues within 4Å:
Chain A:
K.29
,
G.31
,
G.32
,
S.33
,
G.72
,
L.189
,
T.190
,
D.191
,
V.192
,
G.194
,
I.195
,
V.196
,
A.220
,
L.221
,
W.222
,
A.232
,
M.233
,
K.236
Ligands:
MG.2
,
GOL.3
19
PLIP interactions
:
19 interactions with chain A
Hydrogen bonds:
A:G.32
,
A:S.33
,
A:L.189
,
A:T.190
,
A:D.191
,
A:V.196
,
A:V.196
,
A:W.222
,
A:M.233
Water bridges:
A:K.29
,
A:K.29
Salt bridges:
A:K.29
,
A:K.29
,
A:K.236
,
A:K.236
,
A:K.236
pi-Stacking:
A:W.222
,
A:W.222
,
A:W.222
ATP.4:
20 residues within 4Å:
Chain B:
K.29
,
G.31
,
G.32
,
S.33
,
G.72
,
L.189
,
T.190
,
D.191
,
V.192
,
G.194
,
I.195
,
V.196
,
A.220
,
L.221
,
W.222
,
A.232
,
M.233
,
K.236
Ligands:
MG.5
,
GOL.6
19
PLIP interactions
:
19 interactions with chain B
Hydrogen bonds:
B:G.32
,
B:S.33
,
B:L.189
,
B:T.190
,
B:D.191
,
B:V.196
,
B:V.196
,
B:W.222
,
B:M.233
Water bridges:
B:K.29
,
B:K.29
Salt bridges:
B:K.29
,
B:K.29
,
B:K.236
,
B:K.236
,
B:K.236
pi-Stacking:
B:W.222
,
B:W.222
,
B:W.222
2 x
MG
:
MAGNESIUM ION
(Non-functional Binders)
MG.2:
2 residues within 4Å:
Ligands:
ATP.1
,
GOL.3
No protein-ligand interaction detected (PLIP)
MG.5:
2 residues within 4Å:
Ligands:
ATP.4
,
GOL.6
No protein-ligand interaction detected (PLIP)
2 x
GOL
:
GLYCEROL
(Non-functional Binders)
GOL.3:
7 residues within 4Å:
Chain A:
G.72
,
G.73
,
S.168
,
S.169
,
D.170
Ligands:
ATP.1
,
MG.2
5
PLIP interactions
:
5 interactions with chain A
Hydrogen bonds:
A:G.73
,
A:S.168
,
A:S.169
,
A:D.170
Water bridges:
A:T.235
GOL.6:
7 residues within 4Å:
Chain B:
G.72
,
G.73
,
S.168
,
S.169
,
D.170
Ligands:
ATP.4
,
MG.5
5
PLIP interactions
:
5 interactions with chain B
Hydrogen bonds:
B:G.73
,
B:S.168
,
B:S.169
,
B:D.170
,
B:D.170
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Pakhomova, S. et al., Structural and biochemical insights into the mechanism of fosfomycin phosphorylation by fosfomycin resistance kinase FomA. Biochemistry (2011)
Release Date
2011-07-20
Peptides
FomA protein:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
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FomA protein
Toggle Identical (AB)
Related Entries With Identical Sequence
3d40.1
|
3d41.1
|
3quo.1
|
3qur.1
|
3qvf.1
|
3qvh.1
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