SMTL ID : 3quo.1

Crystal structure of fosfomycin resistance kinase FomA from Streptomyces wedmorensis complexed with ATP and fosfomycin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.58 Å

Oligo State

homo-dimer

Ligands

2 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 19 residues within 4Å: Chain A: K.29, G.31, G.32, S.33, K.38, H.78, T.190, D.191, V.192, G.194, I.195, V.196, A.220, L.221, S.224, S.225, A.232, M.233, K.236 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:S.33, A:S.33, A:L.189, A:T.190, A:D.191, A:V.196, A:V.196, A:M.233 Water bridges: A:K.29, A:K.29, A:G.32, A:G.32, A:G.32 Salt bridges: A:K.29, A:K.38, A:K.38, A:H.78, A:K.236, A:K.236 ATP.3: 19 residues within 4Å: Chain B: K.29, G.31, G.32, S.33, K.38, H.78, T.190, D.191, V.192, G.194, I.195, V.196, A.220, L.221, S.224, S.225, A.232, M.233, K.236 19 PLIP interactions: 19 interactions with chain B Hydrogen bonds: B:S.33, B:S.33, B:L.189, B:T.190, B:D.191, B:V.196, B:V.196, B:M.233 Water bridges: B:K.29, B:K.29, B:G.32, B:G.32, B:G.32 Salt bridges: B:K.29, B:K.38, B:K.38, B:H.78, B:K.236, B:K.236

2 x FCN: FOSFOMYCIN(Non-covalent)

FCN.2: 9 residues within 4Å: Chain A: G.72, G.73, G.77, H.78, I.81, G.154, F.167, S.168, S.169 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.73, A:S.169 Water bridges: A:G.74, A:G.154, A:S.169 FCN.4: 9 residues within 4Å: Chain B: G.72, G.73, G.77, H.78, I.81, G.154, F.167, S.168, S.169 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.73, B:S.169 Water bridges: B:G.74, B:G.154, B:S.169

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pakhomova, S. et al., Structural and biochemical insights into the mechanism of fosfomycin phosphorylation by fosfomycin resistance kinase FomA. Biochemistry (2011)

Release Date

2011-07-20

Peptides

FomA protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

FomA protein

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