SMTL ID : 3r0i.1

IspC in complex with an N-methyl-substituted hydroxamic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: D.162, E.164, E.243 Ligands: C0K.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.162, A:E.164, A:E.243, H2O.2 MN.3: 5 residues within 4Å: Chain B: K.137, D.162, E.164, E.243 Ligands: C0K.4 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.162, B:E.164, B:E.243, H2O.22

2 x C0K: {(1S)-1-(3,4-difluorophenyl)-4-[hydroxy(methyl)amino]-4-oxobutyl}phosphonic acid(Non-covalent)

C0K.2: 12 residues within 4Å: Chain A: D.162, S.163, E.164, G.197, S.198, S.234, N.239, K.240, E.243, S.266, M.288 Ligands: MN.1 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:S.163, A:S.198, A:S.198, A:S.234, A:N.239, A:K.240 Water bridges: A:K.137, A:G.199, A:G.199 C0K.4: 11 residues within 4Å: Chain B: D.162, S.163, E.164, G.197, S.198, S.234, N.239, K.240, E.243, S.266 Ligands: MN.3 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:S.163, B:S.198, B:S.198, B:S.234, B:N.239, B:K.240 Water bridges: B:G.199, B:G.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Behrendt, C.T. et al., Reverse Fosmidomycin Derivatives against the Antimalarial Drug Target IspC (Dxr). J.Med.Chem. (2011)

Release Date

2011-09-07

Peptides

1-deoxy-D-xylulose 5-phosphate reductoisomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

1-deoxy-D-xylulose 5-phosphate reductoisomerase