SMTL ID : 3r4d.2 (1 other biounit)

Crystal structure of mouse coronavirus receptor-binding domain complexed with its murine receptor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain A: L.20, V.21, H.22, Y.68, N.70, S.72 No protein-ligand interaction detected (PLIP)

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 1 residues within 4Å: Chain A: N.37 No protein-ligand interaction detected (PLIP) NAG.3: 6 residues within 4Å: Chain A: N.55, T.57, Y.61, E.65, I.66, I.67 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:T.57, A:Y.61 Hydrogen bonds: A:I.67 NAG.4: 3 residues within 4Å: Chain B: Y.130, M.135, N.178 1 PLIP interactions: 1 interactions with chain B Water bridges: B:N.178

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Peng, G. et al., Crystal structure of mouse coronavirus receptor-binding domain complexed with its murine receptor. Proc.Natl.Acad.Sci.USA (2011)

Release Date

2011-06-22

Peptides

CEA-related cell adhesion molecule 1, isoform 1/2S: A
Spike glycoprotein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

CEA-related cell adhesion molecule 1, isoform 1/2S

Spike glycoprotein

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