SMTL ID : 3r67.1 (3 other biounits)

Crystal structure of a putative glycosidase (BT_4094) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.30 A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: N.53, Y.282, Y.318, F.324, D.343 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.53, A:N.53, A:Y.282 Water bridges: A:R.68 EDO.2: 5 residues within 4Å: Chain A: K.232, V.233, I.234, T.235, R.300 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.235, A:T.235, A:R.300 Water bridges: A:K.232, A:T.235 EDO.3: 3 residues within 4Å: Chain A: P.304, F.305, I.307 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:P.304 Water bridges: A:I.307, A:E.309 EDO.4: 3 residues within 4Å: Chain A: Y.88, M.98, Q.155 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.86, A:Q.155 EDO.5: 5 residues within 4Å: Chain A: E.120, W.139, A.144, F.176, K.178 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.120, A:K.178 EDO.6: 8 residues within 4Å: Chain A: N.267, K.268, G.270, G.273, D.274, T.275, Y.277, A.279 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.267, A:G.270, A:D.274, A:A.279 EDO.7: 7 residues within 4Å: Chain A: A.56, T.57, V.124, A.125, Q.191, P.251, L.328 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:T.57, A:T.57, A:Q.191 Water bridges: A:I.58, A:V.126, A:P.251, A:L.328, A:L.328

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a putative glycosidase (BT_4094) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.30 A resolution. To be published

Release Date

2011-04-13

Peptides

putative Glycosidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

putative Glycosidase

Related Entries With Identical Sequence