SMTL ID : 3r7l.2 (1 other biounit)

Crystal Structure of PALA-bound Aspartate Transcarbamoylase from Bacillus subtilis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.59 Å

Oligo State

homo-trimer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: E.55, K.59 Chain B: K.59 Chain C: E.55, K.59 18 PLIP interactions: 7 interactions with chain A, 6 interactions with chain B, 5 interactions with chain C Hydrogen bonds: A:E.55, A:E.55, B:E.55 Water bridges: A:K.59, A:K.59, A:K.59, A:N.67, B:K.59, B:K.59, B:K.59, B:N.67, C:K.59, C:K.59, C:K.59, C:V.65 Salt bridges: A:K.59, B:K.59, C:K.59

3 x PAL: N-(PHOSPHONACETYL)-L-ASPARTIC ACID(Non-covalent)

PAL.2: 16 residues within 4Å: Chain A: P.46, S.47, T.48, R.49, T.50, R.99, H.127, Q.130, R.160, V.161, R.211, Q.213, P.249, A.250 Chain B: S.74, K.77 25 PLIP interactions: 20 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:V.161, A:P.249 Hydrogen bonds: A:S.47, A:T.48, A:R.49, A:R.49, A:T.50, A:T.50, A:R.99, A:R.99, A:Q.213, A:A.250, B:S.74, B:S.74, B:K.77 Water bridges: A:V.161, A:R.211, A:R.211, A:R.216 Salt bridges: A:R.99, A:H.127, A:R.160, A:R.211, B:K.77, B:K.77 PAL.3: 16 residues within 4Å: Chain B: P.46, S.47, T.48, R.49, T.50, R.99, H.127, Q.130, R.160, V.161, R.211, Q.213, P.249, A.250 Chain C: S.74, K.77 24 PLIP interactions: 19 interactions with chain B, 5 interactions with chain C Hydrophobic interactions: B:V.161 Hydrogen bonds: B:S.47, B:T.48, B:R.49, B:R.49, B:T.50, B:T.50, B:R.99, B:R.99, B:Q.213, B:A.250, C:S.74, C:S.74 Water bridges: B:R.160, B:V.161, B:R.211, B:R.211, C:K.77 Salt bridges: B:R.99, B:H.127, B:R.160, B:R.211, C:K.77, C:K.77 PAL.4: 15 residues within 4Å: Chain A: S.74, K.77 Chain C: P.46, S.47, T.48, R.49, T.50, R.99, H.127, R.160, V.161, R.211, Q.213, P.249, A.250 24 PLIP interactions: 19 interactions with chain C, 5 interactions with chain A Hydrophobic interactions: C:V.161 Hydrogen bonds: C:S.47, C:T.48, C:R.49, C:R.49, C:T.50, C:T.50, C:R.99, C:R.99, C:Q.213, C:A.250, A:S.74, A:S.74, A:K.77 Water bridges: C:R.160, C:R.211, C:R.211, C:R.216 Salt bridges: C:R.99, C:H.127, C:R.160, C:R.211, A:K.77, A:K.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harris, K.M. et al., Crystallographic Snapshots of the Complete Catalytic Cycle of the Unregulated Aspartate Transcarbamoylase from Bacillus subtilis. J.Mol.Biol. (2011)

Release Date

2011-06-08

Peptides

Aspartate carbamoyltransferase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

Aspartate carbamoyltransferase

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