SMTL ID : 3rby.1

Crystal structure of uncharacterized protein YLR301w from Saccharomycces cerevisiae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

6 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.1: 4 residues within 4Å: Chain A: V.27, Q.74, F.76, W.100 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.74 Water bridges: A:S.25 PGE.2: 9 residues within 4Å: Chain A: F.11, W.53, F.55, F.78, V.96, T.98, E.110, F.126, E.128 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.110 Water bridges: A:R.37, A:R.37, A:R.37 PGE.3: 4 residues within 4Å: Chain A: F.39, P.50, L.209, S.210 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Water bridges: B:N.146, B:N.146, A:V.40 Hydrogen bonds: A:F.207, A:S.210 PGE.5: 4 residues within 4Å: Chain B: L.6, V.27, Q.74, W.100 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.74 PGE.6: 7 residues within 4Å: Chain B: F.11, W.53, V.96, T.98, E.110, F.126, E.128 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.110 Water bridges: B:R.37 PGE.7: 4 residues within 4Å: Chain B: F.39, P.50, L.209, S.210 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:S.210 Water bridges: A:N.146, A:N.146

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 5 residues within 4Å: Chain A: S.136, A.154, R.155, G.174, R.175 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, K.H. et al., Novel beta-structure of YLR301w from Saccharomyces cerevisiae. Acta Crystallogr.,Sect.D (2012)

Release Date

2012-03-21

Peptides

Uncharacterized protein YLR301W: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uncharacterized protein YLR301W