SMTL ID : 3rxz.1

Crystal structure of putative polysaccharide deacetylase from Mycobacterium smegmatis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

homo-tetramer

Ligands

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: V.33, D.34, A.35, G.59, P.243, F.244 Ligand excluded by PLIP CL.3: 6 residues within 4Å: Chain B: V.33, D.34, A.35, G.59, P.243, F.244 Ligand excluded by PLIP CL.5: 6 residues within 4Å: Chain C: V.33, D.34, A.35, G.59, P.243, F.244 Ligand excluded by PLIP CL.7: 6 residues within 4Å: Chain D: V.33, D.34, A.35, G.59, P.243, F.244 Ligand excluded by PLIP

4 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: D.32, D.34, H.107, H.111 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.34, A:D.34, A:H.107, A:H.111, H2O.4 ZN.4: 4 residues within 4Å: Chain B: D.32, D.34, H.107, H.111 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.34, B:D.34, B:H.111, H2O.103, H2O.104 ZN.6: 5 residues within 4Å: Chain C: D.32, D.34, H.107, H.111, H.242 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:D.34, C:D.34, C:H.107, H2O.182, H2O.247 ZN.8: 4 residues within 4Å: Chain D: D.32, D.34, H.107, H.111 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:D.34, D:H.107, D:H.111, H2O.270, H2O.271

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Michalska, K. et al., Crystal structure of putative polysaccharide deacetylase from Mycobacterium smegmatis. To be Published

Release Date

2011-06-22

Peptides

Polysaccharide deacetylase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Polysaccharide deacetylase