SMTL ID : 3s99.1

Crystal structure of a basic membrane lipoprotein from brucella melitensis, iodide soak

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

17 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 3 residues within 4Å: Chain A: K.231, M.293, P.294 Ligand excluded by PLIP IOD.2: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.3: 3 residues within 4Å: Chain A: W.328, D.336, T.339 Ligand excluded by PLIP IOD.4: 2 residues within 4Å: Chain A: Y.258, W.278 Ligand excluded by PLIP IOD.5: 2 residues within 4Å: Chain A: V.185, D.352 Ligand excluded by PLIP IOD.6: 3 residues within 4Å: Chain A: E.71, G.96, W.191 Ligand excluded by PLIP IOD.7: 2 residues within 4Å: Chain A: R.81, I.82 Ligand excluded by PLIP IOD.8: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.9: 3 residues within 4Å: Chain A: F.108, P.109, D.110 Ligand excluded by PLIP IOD.10: 3 residues within 4Å: Chain A: M.146, D.210, I.211 Ligand excluded by PLIP IOD.11: 2 residues within 4Å: Chain A: K.322, D.324 Ligand excluded by PLIP IOD.12: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP IOD.13: 2 residues within 4Å: Chain A: K.120, T.121 Ligand excluded by PLIP IOD.14: 1 residues within 4Å: Chain A: R.77 Ligand excluded by PLIP IOD.15: 1 residues within 4Å: Chain A: V.252 Ligand excluded by PLIP IOD.16: 1 residues within 4Å: Chain A: E.333 Ligand excluded by PLIP IOD.17: 1 residues within 4Å: Chain A: R.50 Ligand excluded by PLIP

1 x MG: MAGNESIUM ION(Non-covalent)

MG.18: 1 residues within 4Å: Chain A: N.314 No protein-ligand interaction detected (PLIP)

1 x ADE: ADENINE(Non-covalent)

ADE.19: 9 residues within 4Å: Chain A: I.34, W.42, S.94, F.95, T.117, E.162, W.191, H.215, D.217 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:S.94, A:F.95, A:E.162 Water bridges: A:D.217, A:Q.235, A:Q.235 pi-Stacking: A:W.42, A:W.42, A:W.42, A:W.191, A:W.191, A:W.191

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seattle Structural Genomics Center for Infectious Disease (SSGCID) et al., Crystal structure of a basic membrane lipoprotein from brucella melitensis, iodide soak. To be Published

Release Date

2011-06-22

Peptides

Basic membrane lipoprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Basic membrane lipoprotein