SMTL ID : 3sdj.2 (7 other biounits)

Structure of RNase-inactive point mutant of oligomeric kinase/RNase Ire1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.65 Å

Oligo State

homo-dimer

Ligands

2 x APJ: N~2~-1H-BENZIMIDAZOL-5-YL-N~4~-(3-CYCLOPROPYL-1H-PYRAZOL-5-YL)PYRIMIDINE-2,4-DIAMINE(Non-covalent)

APJ.1: 13 residues within 4Å: Chain A: L.41, Y.43, V.50, A.61, L.106, E.107, C.109, L.111, N.112, D.115, Q.162, L.165, D.189 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.50, A:A.61, A:L.106, A:L.165 Hydrogen bonds: A:C.109, A:C.109, A:N.112 APJ.2: 13 residues within 4Å: Chain B: L.41, Y.43, V.50, A.61, L.106, E.107, C.109, L.111, N.112, D.115, Q.162, L.165, D.189 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:V.50, B:A.61, B:L.106, B:L.165 Hydrogen bonds: B:C.109, B:C.109, B:N.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Korennykh, A.V. et al., Structural and functional basis for RNA cleavage by Ire1. Bmc Biol. (2011)

Release Date

2011-07-13

Peptides

Serine/threonine-protein kinase/endoribonuclease IRE1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase/endoribonuclease IRE1

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