SMTL ID : 3sdt.1

Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: H.125, Q.439, R.470, D.472, Y.473, A.474 Ligand excluded by PLIP

3 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.2: 4 residues within 4Å: Chain A: D.566, D.570 Ligands: MG.4, AHD.5 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.566, A:D.570, H2O.23, H2O.24 MG.3: 1 residues within 4Å: Ligands: AHD.5 No protein-ligand interaction detected (PLIP) MG.4: 5 residues within 4Å: Chain A: D.566, D.570, E.644 Ligands: MG.2, AHD.5 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.566, A:D.570, H2O.13, H2O.18, H2O.18

1 x AHD: 4-AMINO-1-HYDROXYBUTANE-1,1-DIYLDIPHOSPHONATE(Non-covalent)

AHD.5: 8 residues within 4Å: Chain A: D.566, D.570, I.667, R.710, D.713 Ligands: MG.2, MG.3, MG.4 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:I.667, A:R.710, A:R.710, A:D.713 Water bridges: A:T.717, A:T.717

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 7 residues within 4Å: Chain A: Q.439, Y.465, V.468, Y.469, R.470, Y.473, N.487 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Q.439, A:Y.465, A:R.470, A:R.470, A:N.487 Water bridges: A:R.310, A:Y.465, A:Y.465

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McAndrew, R.P. et al., Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production. Structure (2011)

Release Date

2011-12-14

Peptides

Alpha-bisabolene synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-bisabolene synthase

Related Entries With Identical Sequence