SMTL ID : 3sqx.1

Structure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.11 Å

Oligo State

monomer

Ligands

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 20 residues within 4Å: Chain A: F.41, G.43, L.44, T.45, Q.48, K.68, T.69, G.70, T.71, G.72, K.73, T.74, F.75, E.183, G.354, D.356, R.381, R.384, S.385 Ligands: MG.2 33 PLIP interactions: 33 interactions with chain A Hydrogen bonds: A:G.43, A:T.45, A:Q.48, A:G.70, A:T.71, A:G.72, A:K.73, A:K.73, A:K.73, A:T.74, A:T.74, A:T.74, A:G.354, A:D.356, A:R.381, A:R.381, A:R.384, A:R.384 Water bridges: A:K.73, A:F.75, A:Q.110, A:Q.110, A:Q.110, A:E.114, A:E.114, A:K.117, A:E.183, A:A.221, A:D.356, A:H.377 Salt bridges: A:R.384 pi-Stacking: A:F.41, A:F.41

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: D.182, E.183 Ligands: ANP.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mohr, G. et al., High-Throughput Genetic Identification of Functionally Important Regions of the Yeast DEAD-Box Protein Mss116p. J.Mol.Biol. (2011)

Release Date

2011-10-12

Peptides

ATP-dependent RNA helicase MSS116, mitochondrial: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ATP-dependent RNA helicase MSS116, mitochondrial