SMTL ID : 3swn.1 (1 other biounit)

Structure of the LSm657 Complex: An Assembly Intermediate of the LSm1 7 and LSm2 8 Rings

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-2-2-2-mer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 1 residues within 4Å: Chain A: D.66 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.66 ZN.2: 5 residues within 4Å: Chain B: E.51, E.60, H.62 Chain C: R.22, Y.71 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain C Metal complexes: B:E.51, B:E.60, B:H.62, C:Y.71 ZN.3: 2 residues within 4Å: Chain C: E.45, D.61 5 PLIP interactions: 2 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:D.61, C:D.61, H2O.1, H2O.1, H2O.1 ZN.4: 2 residues within 4Å: Chain C: S.34, C.35 2 PLIP interactions: 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:C.35, H2O.1 ZN.5: 2 residues within 4Å: Chain D: D.66, D.67 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:D.67 ZN.6: 2 residues within 4Å: Chain C: C.35 Chain D: D.31 3 PLIP interactions: 2 interactions with chain D, 1 interactions with chain C Metal complexes: D:D.31, D:D.31, C:C.35 ZN.7: 5 residues within 4Å: Chain E: E.51, E.60, H.62 Chain F: R.22, Y.71 4 PLIP interactions: 3 interactions with chain E, 1 interactions with chain F Metal complexes: E:E.51, E:E.60, E:H.62, F:Y.71 ZN.8: 1 residues within 4Å: Chain E: E.11 1 PLIP interactions: 1 interactions with chain E Metal complexes: E:E.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mund, M. et al., Structure of the LSm657 complex: an assembly intermediate of the LSm1-7 and LSm2-8 rings. J.Mol.Biol. (2011)

Release Date

2011-10-26

Peptides

U6 snRNA-associated Sm-like protein LSm7: AD
U6 snRNA-associated Sm-like protein LSm5: BE
U6 snRNA-associated Sm-like protein LSm6: CF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

D
F

B
A

E
D

C
B

F
E

U6 snRNA-associated Sm-like protein LSm7

U6 snRNA-associated Sm-like protein LSm5

U6 snRNA-associated Sm-like protein LSm6

Related Entries With Identical Sequence