SMTL ID : 3tkt.1

Crystal structure of CYP108D1 from Novosphingobium aromaticivorans DSM12444

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 29 residues within 4Å: Chain A: L.124, V.125, H.132, R.136, F.143, T.286, A.289, G.290, T.293, T.294, S.297, P.335, V.336, F.339, R.341, Y.364, A.391, F.392, G.393, A.394, S.396, H.397, Q.398, C.399, L.400, G.401, L.404, A.405, E.408 21 PLIP interactions: 21 interactions with chain A, Hydrophobic interactions: A:F.143, A:T.286, A:A.289, A:V.336, A:F.339, A:Y.364, A:F.392, A:L.400, A:L.400, A:L.404 Hydrogen bonds: A:Y.364, A:A.394 Water bridges: A:R.341, A:R.341, A:H.397, A:H.397 Salt bridges: A:H.132, A:R.136, A:R.341, A:H.397 Metal complexes: A:C.399

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bell, S.G. et al., Structure and function of CYP108D1 from Novosphingobium aromaticivorans DSM12444: an aromatic hydrocarbon-binding P450 enzyme. Acta Crystallogr.,Sect.D (2012)

Release Date

2012-02-29

Peptides

Cytochrome P450: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450