SMTL ID : 3tlx.1 (3 other biounits)

Crystal Structure of PF10_0086, adenylate kinase from plasmodium falciparum

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: Q.188, R.189, E.190, N.193 No protein-ligand interaction detected (PLIP) MG.2: 2 residues within 4Å: Chain A: H.240, G.243 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.240

1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.3: 13 residues within 4Å: Chain A: T.60, G.61, L.64, I.82, K.86, L.87, V.88, V.93, G.114, Y.115, R.117, Q.121, R.200 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:T.60, A:K.86, A:V.88, A:Q.121, A:Q.121 Salt bridges: A:R.189, A:R.200

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.4: 18 residues within 4Å: Chain A: A.37, P.38, G.39, S.40, G.41, K.42, G.43, T.44, R.152, R.156, I.165, Y.166, H.167, F.170, N.171, Q.228, P.229, A.230 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:A.37, A:G.39, A:S.40, A:G.41, A:G.41, A:K.42, A:G.43, A:T.44, A:T.44, A:R.152, A:Y.166, A:Q.228 Salt bridges: A:K.42, A:R.156, A:R.156 pi-Cation interactions: A:R.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wernimont, A.K. et al., Crystal Structure of PF10_0086, adenylate kinase from plasmodium falciparum. TO BE PUBLISHED

Release Date

2011-10-26

Peptides

Adenylate kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Adenylate kinase 2

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