- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 2 x FUM: FUMARIC ACID(Non-covalent)
FUM.2: 13 residues within 4Å:- Chain A: K.78, N.102, M.104, G.105, L.106, P.107, N.162, S.164, C.165, P.166, N.167, N.229
- Ligands: FMN.1
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:N.102, A:M.104, A:G.105, A:L.106, A:N.162, A:N.167, A:N.229, A:S.230
- Salt bridges: A:K.78, A:K.199
FUM.10: 13 residues within 4Å:- Chain B: K.78, N.102, M.104, G.105, L.106, P.107, N.162, S.164, C.165, P.166, N.167, N.229
- Ligands: FMN.9
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:M.104, B:G.105, B:L.106, B:N.162, B:N.167, B:N.229
- Salt bridges: B:K.78, B:K.199
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 6 residues within 4Å:- Chain A: V.236, I.237, Y.259
- Chain B: L.261, L.265, L.294
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:I.237
- Water bridges: A:Y.259, A:Y.259, B:D.291
GOL.11: 5 residues within 4Å:- Chain A: L.261, L.265, L.294
- Chain B: V.236, I.237
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:I.237
- Water bridges: B:Y.259, A:D.291
- 1 x NI: NICKEL (II) ION(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.5: 3 residues within 4Å:- Chain A: P.193, H.194, S.195
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:S.195
- Salt bridges: A:H.194
SO4.6: 2 residues within 4Å:- Chain A: P.193, K.221
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:P.193
- Salt bridges: A:K.221
SO4.7: 2 residues within 4Å:- Chain A: R.273, T.345
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.345
- Water bridges: A:R.273, A:T.345
- Salt bridges: A:R.273
SO4.8: 2 residues within 4Å:- Chain A: Y.272, R.340
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Y.272
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cordeiro, A.T. et al., Crystal structure of dihydroorotate dehydrogenase from Leishmania major. Biochimie (2012)
- Release Date
- 2012-05-16
- Peptides
- Dihydroorotate dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 2 x FUM: FUMARIC ACID(Non-covalent)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 1 x NI: NICKEL (II) ION(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cordeiro, A.T. et al., Crystal structure of dihydroorotate dehydrogenase from Leishmania major. Biochimie (2012)
- Release Date
- 2012-05-16
- Peptides
- Dihydroorotate dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B