SMTL ID : 3u6k.1 (1 other biounit)

Ef-tu (escherichia coli) in complex with nvp-ldk733

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 17 residues within 4Å: Chain A: H.20, V.21, D.22, H.23, G.24, K.25, T.26, T.27, F.47, N.136, K.137, D.139, M.140, S.174, A.175, L.176 Ligands: MG.2 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:H.20, A:D.22, A:H.23, A:G.24, A:K.25, A:T.26, A:T.27, A:T.27, A:N.136, A:K.137, A:K.137, A:D.139, A:S.174, A:A.175, A:L.176 Water bridges: A:T.26, A:T.26, A:C.82 Salt bridges: A:K.25, A:D.139 pi-Cation interactions: A:K.137

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: T.26, C.82, P.83 Ligands: GDP.1 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.26, H2O.2, H2O.2, H2O.2, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

LaMarche, M.J. et al., Antibacterial optimization of 4-aminothiazolyl analogues of the natural product GE2270 A: identification of the cycloalkylcarboxylic acids. J.Med.Chem. (2011)

Release Date

2012-02-08

Peptides

Elongation factor Tu 1: A
Thiocillin GE2270 analogue NVP-LDK733: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Elongation factor Tu 1

Thiocillin GE2270 analogue NVP-LDK733

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