SMTL ID : 3um9.1

Crystal Structure of the Defluorinating L-2-Haloacid Dehalogenase Bpro0530

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

homo-dimer

Ligands

2 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 4 residues within 4Å: Chain A: G.1, M.2, H.3, A.4 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.3 NI.3: 4 residues within 4Å: Chain B: G.1, M.2, H.3, A.4 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:H.3

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 7 residues within 4Å: Chain A: D.11, L.12, Y.13, L.118, S.119, N.120, K.152 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:D.11, A:L.12, A:Y.13, A:Y.13, A:S.119, A:N.120, A:N.120 Water bridges: A:R.42, A:R.42 Salt bridges: A:K.152 SO4.4: 7 residues within 4Å: Chain B: D.11, L.12, Y.13, S.119, N.120, K.152, D.181 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:L.12, B:Y.13, B:N.120, B:N.120, B:D.181 Water bridges: B:R.42 Salt bridges: B:K.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chan, P.W.Y. et al., Structural adaptations of L-2-haloacid dehalogenases that enable hydrolytic defluorination. To be Published

Release Date

2012-11-14

Peptides

Haloacid dehalogenase, type II: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Haloacid dehalogenase, type II