SMTL ID : 3umd.1

Structure of pB intermediate of Photoactive yellow protein (PYP) at pH 4.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x HC4: 4'-HYDROXYCINNAMIC ACID(Covalent)

HC4.1: 10 residues within 4Å: Chain A: T.50, R.52, V.66, A.67, P.68, C.69, T.70, F.96, Y.98, M.100 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:T.50, A:V.66, A:A.67, A:T.70, A:F.96, A:F.96 Hydrogen bonds: A:R.52, A:R.52, A:C.69, A:Y.98 Water bridges: A:Q.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tripathi, S. et al., pH Dependence of the Photoactive Yellow Protein Photocycle Investigated by Time-Resolved Crystallography. Biophys.J. (2012)

Release Date

2012-04-11

Peptides

Photoactive yellow protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Photoactive yellow protein

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