SMTL ID : 3uri.1

Endothiapepsin-DB5 complex.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x PRO- HIS- LEU- SER- 13E- ALA- HIS: DB5 peptide(Non-covalent)

PRO-HIS-LEU-SER-13E-ALA-HIS.1: 22 residues within 4Å: Chain A: D.15, A.16, D.33, D.35, G.37, S.77, Y.78, G.79, D.80, S.82, F.115, I.121, L.124, F.193, D.218, G.220, T.221, T.222, L.223, F.279, F.290, I.299 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:D.15, A:A.16, A:Y.78, A:F.115, A:I.121, A:L.124, A:F.193 Hydrogen bonds: A:D.15, A:G.37, A:G.79, A:D.80, A:D.80, A:G.220, A:T.222, A:T.222, A:T.222 Water bridges: A:Y.225, A:Y.225, A:Y.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bailey, D. et al., An analysis of subdomain orientation, conformational change and disorder in relation to crystal packing of aspartic proteinases. Acta Crystallogr.,Sect.D (2012)

Release Date

2012-04-18

Peptides

Endothiapepsin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Endothiapepsin

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