SMTL ID : 3utp.1 (1 other biounit)

1E6 TCR specific for HLA-A*0201-ALWGPDPAAA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.57 Å

Oligo State

hetero-oligomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: D.57, G.58, R.59, F.60 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.57, A:R.59, A:R.59

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: I.17, R.76 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.76 Salt bridges: A:R.76 SO4.3: 2 residues within 4Å: Chain A: Y.38, K.41 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.41 SO4.5: 7 residues within 4Å: Chain B: I.5, Q.6, S.7, R.22, C.23, K.24, F.74 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.7 SO4.6: 3 residues within 4Å: Chain B: K.68, M.69, P.70 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:M.69 Salt bridges: B:K.68 SO4.7: 4 residues within 4Å: Chain B: P.8, R.9, H.10, Y.217 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.9, B:H.10 Water bridges: B:S.7

1 x BTB: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

BTB.4: 5 residues within 4Å: Chain B: T.20, K.68, F.74, T.76, K.78 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:T.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bulek, A.M. et al., Structural basis for the killing of human beta cells by CD8(+) T cells in type 1 diabetes. Nat.Immunol. (2012)

Release Date

2012-01-25

Peptides

1E6 TCR alpha chain: A
1E6 TCR beta chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

1E6 TCR alpha chain

1E6 TCR beta chain

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