SMTL ID : 3vcc.3 (2 other biounits)

CRYSTAL STRUCTURE OF D-Galacturonate Dehydratase from GEOBACILLUS SP. complexed with Mg

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

homo-dimer

Ligands

4 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: E.234, E.238, D.261 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.234, A:E.238, A:D.261, H2O.1, H2O.1, H2O.9 MG.2: 4 residues within 4Å: Chain A: K.170, D.207, E.233, E.263 6 PLIP interactions: 3 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.207, A:E.233, A:E.263, H2O.1, H2O.2, H2O.4 MG.4: 3 residues within 4Å: Chain B: E.234, E.238, D.261 6 PLIP interactions: 3 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:E.234, B:E.238, B:D.261, H2O.12, H2O.12, H2O.12 MG.5: 4 residues within 4Å: Chain B: K.170, D.207, E.233, E.263 6 PLIP interactions: 3 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.207, B:E.233, B:E.263, H2O.13, H2O.13, H2O.15

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 4 residues within 4Å: Chain B: D.370, E.372, L.373, Y.376 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.370, B:L.373

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fedorov, A.A. et al., CRYSTAL STRUCTURE OF D-Galacturonate Dehydratase from GEOBACILLUS SP. complexed with Mg. To be Published

Release Date

2013-01-09

Peptides

Mandelate racemase/muconate lactonizing protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Mandelate racemase/muconate lactonizing protein

Related Entries With Identical Sequence