SMTL ID : 3vnp.1

Crystal structure of hypothetical protein (GK2848) from Geobacillus Kaustophilus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-trimer

Ligands

3 x ACY: ACETIC ACID(Non-functional Binders)

ACY.1: 2 residues within 4Å: Chain A: R.142, D.148 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.142 ACY.3: 5 residues within 4Å: Chain B: F.114, L.132, R.142, L.144, D.148 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:F.114, B:L.132, B:L.144 Salt bridges: B:R.142 ACY.5: 3 residues within 4Å: Chain C: F.114, R.142, D.148 1 PLIP interactions: 1 interactions with chain C Salt bridges: C:R.142

3 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: H.65, H.87 Chain C: Q.59, H.82, Y.159 4 PLIP interactions: 2 interactions with chain A, 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: A:H.65, A:H.87, C:H.82, H2O.4 MG.4: 4 residues within 4Å: Chain A: Q.59, H.82 Chain B: H.65, H.87 4 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: A:H.82, B:H.65, B:H.87, H2O.1 MG.6: 4 residues within 4Å: Chain B: Q.59, H.82 Chain C: H.65, H.87 4 PLIP interactions: 1 interactions with chain B, 2 interactions with chain C, 1 Ligand-Water interactions Metal complexes: B:H.82, C:H.65, C:H.87, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karthe, P.P. et al., Crystal structure of hypothetical protein (GK2848) from Geobacillus Kaustophilus. To be Published

Release Date

2012-03-07

Peptides

Hypothetical conserved protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Hypothetical conserved protein