SMTL ID : 3vop.1

Structure of Vaccinia virus A27

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-trimer

Ligands

9 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 4 residues within 4Å: Chain A: D.56, F.60, R.61 Ligands: PEG.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.56, A:R.61, A:R.61 PEG.2: 2 residues within 4Å: Chain A: K.53 Ligands: PEG.1 1 PLIP interactions: 1 interactions with chain A Water bridges: A:E.57 PEG.3: 3 residues within 4Å: Chain B: K.53, D.56 Ligands: PEG.5 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.56 PEG.4: 3 residues within 4Å: Chain B: E.49, K.50, K.53 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.53 PEG.5: 4 residues within 4Å: Chain B: D.56, F.60, E.63 Ligands: PEG.3 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.63 PEG.6: 4 residues within 4Å: Chain A: E.63 Chain B: V.58, R.61, L.62 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:R.61, A:E.63, A:E.63 PEG.7: 8 residues within 4Å: Chain A: E.49, A.52, K.53, D.56 Chain B: K.44, I.48, A.51, R.54 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.44, B:R.54, B:R.54 PEG.8: 1 residues within 4Å: Chain C: Q.47 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:Q.47 PEG.9: 3 residues within 4Å: Chain C: R.54, E.57, V.58 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:E.57, C:E.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, T.H. et al., Crystal structure of vaccinia viral A27 protein reveals a novel structure critical for its function and complex formation with A26 protein. Plos Pathog. (2013)

Release Date

2013-03-06

Peptides

Protein A27: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Protein A27