SMTL ID : 3vr0.1

Crystal structure of Pyrococcus furiosus PbaB, an archaeal proteasome activator

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-tetramer

Ligands

18 x AU: GOLD ION(Non-covalent)(Non-functional Binders)

AU.1: 3 residues within 4Å: Chain A: C.175, S.176, S.229 Ligand excluded by PLIP AU.2: 2 residues within 4Å: Chain A: H.69, E.121 Ligand excluded by PLIP AU.3: 3 residues within 4Å: Chain A: Q.110, H.119, A.192 Ligand excluded by PLIP AU.4: 4 residues within 4Å: Chain A: G.41, I.42, G.142, G.143 Ligand excluded by PLIP AU.5: 4 residues within 4Å: Chain B: C.175, S.176, S.229, K.233 Ligand excluded by PLIP AU.6: 4 residues within 4Å: Chain B: Q.110, H.119, G.191, A.192 Ligand excluded by PLIP AU.7: 3 residues within 4Å: Chain B: H.69, Y.117, E.121 Ligand excluded by PLIP AU.8: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP AU.9: 3 residues within 4Å: Chain B: I.42, G.142, G.143 Ligand excluded by PLIP AU.10: 4 residues within 4Å: Chain C: C.175, S.176, S.229, K.233 Ligand excluded by PLIP AU.11: 3 residues within 4Å: Chain C: H.69, E.121 Chain D: Y.117 Ligand excluded by PLIP AU.12: 3 residues within 4Å: Chain C: Q.110, H.119, A.192 Ligand excluded by PLIP AU.13: 4 residues within 4Å: Chain C: G.41, I.42, G.142, G.143 Ligand excluded by PLIP AU.14: 3 residues within 4Å: Chain D: C.175, S.176, S.229 Ligand excluded by PLIP AU.15: 2 residues within 4Å: Chain D: Y.91, K.93 Ligand excluded by PLIP AU.16: 3 residues within 4Å: Chain A: Y.117 Chain D: H.69, E.121 Ligand excluded by PLIP AU.17: 4 residues within 4Å: Chain D: Q.110, H.119, G.191, A.192 Ligand excluded by PLIP AU.18: 3 residues within 4Å: Chain D: G.41, I.42, G.143 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumoi, K. et al., An archaeal homolog of proteasome assembly factor functions as a proteasome activator. Plos One (2013)

Release Date

2013-04-03

Peptides

Putative uncharacterized protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Putative uncharacterized protein