- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 20 x GOL: GLYCEROL(Non-functional Binders)
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.11: 3 residues within 4Å:- Chain A: K.390, R.424, Y.431
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:K.390, A:R.424
SO4.12: 4 residues within 4Å:- Chain A: R.93, A.180, P.182
- Ligands: GOL.1
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.184
- Salt bridges: A:R.93
SO4.25: 3 residues within 4Å:- Chain B: K.390, R.424, Y.431
2 PLIP interactions:2 interactions with chain B- Salt bridges: B:K.390, B:R.424
SO4.26: 4 residues within 4Å:- Chain B: R.93, A.180, P.182
- Ligands: GOL.15
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Q.184
- Salt bridges: B:R.93
- 2 x PO3: PHOSPHITE ION(Non-covalent)
- 2 x ST7: N,N-dibenzyl-N~5~-[N-(methylcarbamoyl)carbamimidoyl]-N~2~-{[5-({[(E)-(quinolin-4-ylmethylidene)amino]oxy}methyl)-1H-1,2,3-triazol-1-yl]acetyl}-L-ornithinamide(Non-covalent)
ST7.14: 17 residues within 4Å:- Chain A: Y.14, F.16, W.101, D.146, E.148, M.216, Y.218, D.219, P.223, W.224, Y.296, R.298, G.318, D.320, R.342, I.343, W.407
21 PLIP interactions:21 interactions with chain A- Hydrophobic interactions: A:W.101, A:W.101, A:W.224, A:I.343, A:W.407
- Hydrogen bonds: A:D.146, A:R.298, A:R.298
- Water bridges: A:W.101, A:W.101, A:D.219, A:D.219
- Salt bridges: A:E.148, A:D.219
- pi-Stacking: A:F.16, A:W.101, A:W.224, A:W.224, A:W.224, A:Y.296
- pi-Cation interactions: A:R.342
ST7.28: 17 residues within 4Å:- Chain B: Y.14, F.16, W.101, D.146, E.148, M.216, Y.218, D.219, P.223, W.224, Y.296, R.298, G.318, D.320, R.342, I.343, W.407
21 PLIP interactions:21 interactions with chain B- Hydrophobic interactions: B:W.101, B:W.101, B:W.224, B:I.343, B:W.407
- Hydrogen bonds: B:D.146, B:Y.218, B:R.298, B:R.298
- Water bridges: B:W.101, B:W.101, B:Y.149
- Salt bridges: B:E.148, B:D.219
- pi-Stacking: B:F.16, B:W.101, B:W.224, B:W.224, B:W.224, B:Y.296
- pi-Cation interactions: B:R.342
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hirose, T. et al., Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor. Proc.Natl.Acad.Sci.USA (2013)
- Release Date
- 2013-09-18
- Peptides
- Chitinase B: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 20 x GOL: GLYCEROL(Non-functional Binders)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 2 x PO3: PHOSPHITE ION(Non-covalent)
- 2 x ST7: N,N-dibenzyl-N~5~-[N-(methylcarbamoyl)carbamimidoyl]-N~2~-{[5-({[(E)-(quinolin-4-ylmethylidene)amino]oxy}methyl)-1H-1,2,3-triazol-1-yl]acetyl}-L-ornithinamide(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hirose, T. et al., Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor. Proc.Natl.Acad.Sci.USA (2013)
- Release Date
- 2013-09-18
- Peptides
- Chitinase B: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A