- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.6: 2 residues within 4Å:- Chain A: R.352, Q.356
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Q.356, A:Q.356
- Water bridges: A:R.352
- Salt bridges: A:R.352
SO4.7: 5 residues within 4Å:- Chain A: S.323, P.324, Y.325, R.458, N.459
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:Y.325, A:N.459
- Water bridges: A:S.323, A:R.458
- Salt bridges: A:R.458
SO4.16: 2 residues within 4Å:- Chain B: R.352, Q.356
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Q.356
- Salt bridges: B:R.352
SO4.17: 5 residues within 4Å:- Chain B: S.323, P.324, Y.325, R.458, N.459
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:Y.325, B:N.459
- Water bridges: B:R.458, B:D.492
- Salt bridges: B:R.458
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.8: 6 residues within 4Å:- Chain A: F.243, G.244, T.245, G.246, S.247, Y.271
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:G.244, A:G.246
EDO.9: 4 residues within 4Å:- Chain A: A.316, Y.317, W.318, Y.414
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Y.317, A:Y.317
EDO.19: 4 residues within 4Å:- Chain B: A.316, Y.317, W.318, Y.414
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Y.317, B:Y.317
EDO.20: 5 residues within 4Å:- Chain B: F.243, G.244, T.245, G.246, S.247
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:G.244, B:G.246, B:S.247, B:S.247, B:S.247
- Water bridges: B:D.242
- 2 x 6GJ: (3E,5S,6R,7S,8S,8aS)-3-(butylimino)hexahydro[1,3]thiazolo[3,4-a]pyridine-5,6,7,8-tetrol(Non-covalent)
6GJ.10: 14 residues within 4Å:- Chain A: Y.84, I.127, C.128, A.129, E.130, N.188, E.189, D.242, E.269, Y.271, W.274, L.275, Y.307, Y.334
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:Y.84, A:A.129, A:E.130, A:E.130, A:N.188, A:E.189, A:E.189
- Water bridges: A:E.189
6GJ.15: 13 residues within 4Å:- Chain B: Y.84, I.127, C.128, A.129, E.130, N.188, E.189, E.269, Y.271, W.274, L.275, Y.307, Y.334
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:W.274
- Hydrogen bonds: B:Y.84, B:Y.84, B:A.129, B:E.130, B:E.130, B:N.188, B:E.189, B:E.189
- Water bridges: B:E.130
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Suzuki, H. et al., Structural basis of pharmacological chaperoning for human beta-galactosidase. to be published
- Release Date
- 2014-04-23
- Peptides
- Beta-galactosidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x 6GJ: (3E,5S,6R,7S,8S,8aS)-3-(butylimino)hexahydro[1,3]thiazolo[3,4-a]pyridine-5,6,7,8-tetrol(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Suzuki, H. et al., Structural basis of pharmacological chaperoning for human beta-galactosidase. to be published
- Release Date
- 2014-04-23
- Peptides
- Beta-galactosidase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
C